PH01000007G2970's details annotation
1.Annotation
ICBR annotation: UDP-3-O- N-acetylglucosamine deacetylase, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000007
Strand: +
| Region | Start | End |
| gene | 1970127 | 1976453 |
| mRNA | 1970127 | 1976453 |
| exon | 1970127 | 1970667 |
| exon | 1971532 | 1971663 |
| exon | 1971825 | 1971938 |
| exon | 1972388 | 1972485 |
| exon | 1972564 | 1972609 |
| exon | 1974334 | 1974537 |
| exon | 1974807 | 1974905 |
| exon | 1975995 | 1976122 |
| exon | 1976165 | 1976453 |
| CDS | 1970551 | 1970667 |
| CDS | 1971532 | 1971663 |
| CDS | 1971825 | 1971938 |
| CDS | 1972388 | 1972485 |
| CDS | 1972564 | 1972609 |
| CDS | 1974334 | 1974537 |
| CDS | 1974807 | 1974905 |
| CDS | 1975995 | 1976122 |
| CDS | 1976165 | 1976231 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13374.5 | TPR_10 | 129 | 167 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.