PH01000025G0810's details annotation
1.Annotation
ICBR annotation: protein kinase domain containing protein, expressed
Blast result AT3G50380 : 2.00E-61
Blast annotation: Protein of unknown function (DUF1162)
2.Location
Scaffold: PH01000025
Strand: +
| Region | Start | End |
| gene | 585614 | 590735 |
| mRNA | 585614 | 590735 |
| exon | 585614 | 586024 |
| exon | 586476 | 586596 |
| exon | 586677 | 586801 |
| exon | 586922 | 587592 |
| exon | 587685 | 587859 |
| exon | 587954 | 588034 |
| exon | 588352 | 588446 |
| exon | 589485 | 589554 |
| exon | 590081 | 590735 |
| CDS | 585839 | 586024 |
| CDS | 586476 | 586596 |
| CDS | 586677 | 586801 |
| CDS | 586922 | 587592 |
| CDS | 587685 | 587859 |
| CDS | 587954 | 588034 |
| CDS | 588352 | 588446 |
| CDS | 589485 | 589554 |
| CDS | 590081 | 590191 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000625 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.