PH01000056G0160's details annotation
1.Annotation
ICBR annotation: hypothetical_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000056
Strand: +
| Region | Start | End |
| gene | 163235 | 168334 |
| mRNA | 163235 | 168334 |
| exon | 163235 | 163328 |
| exon | 163568 | 163594 |
| exon | 164290 | 164349 |
| exon | 164439 | 164636 |
| exon | 164741 | 164800 |
| exon | 165501 | 165603 |
| exon | 166017 | 166080 |
| exon | 166422 | 166611 |
| exon | 167669 | 168334 |
| CDS | 163284 | 163328 |
| CDS | 163568 | 163594 |
| CDS | 164290 | 164349 |
| CDS | 164439 | 164636 |
| CDS | 164741 | 164800 |
| CDS | 165501 | 165603 |
| CDS | 166017 | 166080 |
| CDS | 166422 | 166611 |
| CDS | 167669 | 168097 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000048 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05184.14 | SapB_1 | 89 | 123 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006629 | lipid metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.