PH01000056G0640's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000056
Strand: -
| Region | Start | End |
| gene | 480642 | 483333 |
| mRNA | 480642 | 483333 |
| exon | 480642 | 481199 |
| exon | 481297 | 481388 |
| exon | 481482 | 482172 |
| exon | 482549 | 482712 |
| exon | 482801 | 483333 |
| CDS | 481088 | 481199 |
| CDS | 481297 | 481388 |
| CDS | 481482 | 482172 |
| CDS | 482549 | 482712 |
| CDS | 482801 | 483118 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00730.24 | HhH-GPD | 275 | 401 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0006281 | DNA repair |
| GO:0006284 | base-excision repair |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.