PH01000063G1660's details annotation
1.Annotation
ICBR annotation: protein kinase, putative, expressed
Blast result AT3G59350 : 5.00E-137
Blast annotation: Protein kinase superfamily protein
2.Location
Scaffold: PH01000063
Strand: +
| Region | Start | End |
| gene | 1118676 | 1127289 |
| mRNA | 1118676 | 1127289 |
| exon | 1118676 | 1119473 |
| exon | 1120071 | 1120131 |
| exon | 1120587 | 1120822 |
| exon | 1120939 | 1121065 |
| exon | 1121220 | 1121493 |
| exon | 1121830 | 1121962 |
| exon | 1122514 | 1122600 |
| exon | 1122723 | 1122744 |
| exon | 1123757 | 1124146 |
| exon | 1124291 | 1124388 |
| exon | 1124534 | 1124585 |
| exon | 1124984 | 1125084 |
| exon | 1125192 | 1125277 |
| exon | 1125560 | 1125638 |
| exon | 1126204 | 1127289 |
| CDS | 1119252 | 1119473 |
| CDS | 1120071 | 1120131 |
| CDS | 1120587 | 1120822 |
| CDS | 1120939 | 1121065 |
| CDS | 1121220 | 1121493 |
| CDS | 1121830 | 1121962 |
| CDS | 1122514 | 1122600 |
| CDS | 1122723 | 1122744 |
| CDS | 1123757 | 1124146 |
| CDS | 1124291 | 1124388 |
| CDS | 1124534 | 1124585 |
| CDS | 1124984 | 1125084 |
| CDS | 1125192 | 1125277 |
| CDS | 1125560 | 1125638 |
| CDS | 1126204 | 1126707 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07714.16 | Pkinase_Tyr | 133 | 341 |
| PF00076.21 | RRM_1 | 534 | 613 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000166 | nucleotide binding |
| GO:0003676 | nucleic acid binding |
| GO:0004672 | protein kinase activity |
| GO:0004713 | protein tyrosine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.