PH01000066G1410's details annotation
1.Annotation
ICBR annotation: amidophosphoribosyltransferase, chloroplast precursor, putative, expressed
Blast result AT2G16570 : 3.00E-104
Blast annotation: GLN phosphoribosyl pyrophosphate amidotransferase 1
2.Location
Scaffold: PH01000066
Strand: +
| Region | Start | End |
| gene | 972439 | 975183 |
| mRNA | 972439 | 975183 |
| exon | 972439 | 972899 |
| exon | 973042 | 973293 |
| exon | 973490 | 975183 |
| CDS | 972528 | 972899 |
| CDS | 973042 | 973293 |
| CDS | 973490 | 974173 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13537.5 | GATase_7 | 125 | 205 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004044 | amidophosphoribosyltransferase activity |
| GO:0008152 | metabolic process |
| GO:0009113 | purine nucleobase biosynthetic process |
| GO:0009116 | nucleoside metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.