PH01000085G0730's details annotation
1.Annotation
ICBR annotation: hypothetical_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000085
Strand: -
| Region | Start | End |
| gene | 656744 | 662148 |
| mRNA | 656744 | 662148 |
| exon | 656744 | 657052 |
| exon | 657878 | 657935 |
| exon | 658161 | 658375 |
| exon | 658682 | 658777 |
| exon | 659010 | 659066 |
| exon | 659814 | 660074 |
| exon | 660439 | 660529 |
| exon | 660639 | 660671 |
| exon | 660804 | 661436 |
| exon | 661806 | 662148 |
| CDS | 656952 | 657052 |
| CDS | 657878 | 657935 |
| CDS | 658161 | 658375 |
| CDS | 658682 | 658777 |
| CDS | 659010 | 659066 |
| CDS | 659814 | 660074 |
| CDS | 660439 | 660529 |
| CDS | 660639 | 660671 |
| CDS | 660804 | 661436 |
| CDS | 661806 | 661904 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05637.11 | Glyco_transf_34 | 168 | 386 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Various types of N-glycan biosynthesis | mannan polymerase II complex MNN10 subunit [EC:2.4.1.-] | ko00513 | K05531 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
| GO:0016758 | transferase activity, transferring hexosyl groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.