PH01000091G1160's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G64170 : 1.40E-30
Blast annotation: dentin sialophosphoprotein-related
2.Location
Scaffold: PH01000091
Strand: +
| Region | Start | End |
| gene | 787919 | 795731 |
| mRNA | 787919 | 795731 |
| exon | 787919 | 788702 |
| exon | 789568 | 789624 |
| exon | 790652 | 790682 |
| exon | 791598 | 792092 |
| exon | 792175 | 792385 |
| exon | 792555 | 792626 |
| exon | 793213 | 793432 |
| exon | 793523 | 793797 |
| exon | 794068 | 794216 |
| exon | 794775 | 795731 |
| CDS | 788459 | 788702 |
| CDS | 789568 | 789624 |
| CDS | 790652 | 790682 |
| CDS | 791598 | 792092 |
| CDS | 792175 | 792385 |
| CDS | 792555 | 792626 |
| CDS | 793213 | 793432 |
| CDS | 793523 | 793797 |
| CDS | 794068 | 794216 |
| CDS | 794775 | 794892 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.