PH01000095G1390's details annotation
1.Annotation
ICBR annotation: cytidylyltransferase domain containing protein, expressed
Blast result AT2G32260 : 8.00E-82
Blast annotation: phosphorylcholine cytidylyltransferase
2.Location
Scaffold: PH01000095
Strand: -
| Region | Start | End |
| gene | 960834 | 966000 |
| mRNA | 960834 | 966000 |
| exon | 960834 | 961988 |
| exon | 962082 | 962180 |
| exon | 962848 | 962928 |
| exon | 963330 | 963372 |
| exon | 963593 | 963688 |
| exon | 963829 | 963942 |
| exon | 965496 | 966000 |
| CDS | 961869 | 961988 |
| CDS | 962082 | 962180 |
| CDS | 962848 | 962928 |
| CDS | 963330 | 963372 |
| CDS | 963593 | 963688 |
| CDS | 963829 | 963942 |
| CDS | 965496 | 965698 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01467.25 | CTP_transf_like | 46 | 159 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0009058 | biosynthetic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.