PH01000109G0800's details annotation
1.Annotation
ICBR annotation: histidine acid phosphatase, putative, expressed
Blast result AT3G01310 : 8.00E-93
Blast annotation: Phosphoglycerate mutase-like family protein
2.Location
Scaffold: PH01000109
Strand: -
| Region | Start | End |
| gene | 534416 | 539965 |
| mRNA | 534416 | 539965 |
| exon | 534416 | 535152 |
| exon | 535232 | 535310 |
| exon | 537822 | 537892 |
| exon | 537981 | 538080 |
| exon | 538158 | 538364 |
| exon | 538472 | 538566 |
| exon | 539422 | 539496 |
| exon | 539682 | 539965 |
| CDS | 535027 | 535152 |
| CDS | 535232 | 535310 |
| CDS | 537822 | 537892 |
| CDS | 537981 | 538080 |
| CDS | 538158 | 538364 |
| CDS | 538472 | 538566 |
| CDS | 539422 | 539496 |
| CDS | 539682 | 539705 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00328.21 | His_Phos_2 | 124 | 223 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003993 | acid phosphatase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.