PH01000109G0840's details annotation
1.Annotation
ICBR annotation: histidine acid phosphatase, putative, expressed
Blast result AT3G01310 : 2.80E-59
Blast annotation: Phosphoglycerate mutase-like family protein
2.Location
Scaffold: PH01000109
Strand: -
| Region | Start | End |
| gene | 553300 | 558199 |
| mRNA | 553300 | 558199 |
| exon | 553300 | 553583 |
| exon | 554540 | 554642 |
| exon | 555278 | 555361 |
| exon | 555863 | 555909 |
| exon | 556241 | 556247 |
| exon | 556395 | 556441 |
| exon | 556994 | 557053 |
| exon | 557187 | 558199 |
| CDS | 553416 | 553583 |
| CDS | 554540 | 554642 |
| CDS | 555278 | 555361 |
| CDS | 555863 | 555909 |
| CDS | 556241 | 556247 |
| CDS | 556395 | 556441 |
| CDS | 556994 | 557053 |
| CDS | 557187 | 557258 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.