Gene details

Annotation of co-expression genes

PH01000120G0330's details annotation

1.Annotation

ICBR annotation: 26S protease regulatory subunit, putative, expressed

Blast result AT1G45000 : 0.00E+00
Blast annotation: AAA-type ATPase family protein

2.Location

Scaffold: PH01000120
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000789	Glycine,_serine_and_threonine_metabolism Proteasome
coexpression network	CFinderM001421	protein catabolic process, Proteasome Glycine,_serine_and_threonine_metabolism protein phosphatase type 2A complex, cytoplasm, protein phosphatase type 2A regulator activity, Rab GDP-dissociation inhibitor activity, nucleoside-triphosphatase activity, hydrolase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00004.28	AAA	177	310

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Proteasome	26S proteasome regulatory subunit T4	ko03051	K03064

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0005524	ATP binding
GO:0005737	cytoplasm
GO:0016787	hydrolase activity
GO:0017111	nucleoside-triphosphatase activity
GO:0030163	protein catabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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