PH01000126G0810's details annotation
1.Annotation
ICBR annotation: exportin 1, putative, expressed
Blast result AT3G05040 : 1.00E-107
Blast annotation: ARM repeat superfamily protein
2.Location
Scaffold: PH01000126
Strand: +
| Region | Start | End |
| gene | 676148 | 683771 |
| mRNA | 676148 | 683771 |
| exon | 676148 | 677374 |
| exon | 677554 | 677669 |
| exon | 677918 | 678150 |
| exon | 678608 | 679108 |
| exon | 679209 | 679503 |
| exon | 679579 | 679617 |
| exon | 680493 | 680598 |
| exon | 683395 | 683771 |
| CDS | 677245 | 677374 |
| CDS | 677554 | 677669 |
| CDS | 677918 | 678150 |
| CDS | 678608 | 679108 |
| CDS | 679209 | 679503 |
| CDS | 679579 | 679617 |
| CDS | 680493 | 680598 |
| CDS | 683395 | 683474 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001342 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.