Gene details

Annotation of co-expression genes

PH01000140G1080's details annotation

1.Annotation

ICBR annotation: KH domain containing protein, putative, expressed

Blast result AT5G04430 : 1.00E-101
Blast annotation: binding to TOMV RNA 1L (long form)

2.Location

Scaffold: PH01000140
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001275	HB-other Transcription_Regulator(from PlantTFDB) mRNA_surveillance_pathway
coexpression network	CFinderM001438	HB-other Transcription_Regulator(from PlantTFDB)
coexpression network	CFinderM001631	Pseudo ARR-B Transcription_Regulator(from iTAK) transaminase activity, transferase activity, transferring alkyl or aryl (other than methyl) groups, inorganic diphosphatase activity, hydrogen-translocating pyrophosphatase activity, peptidyl-prolyl cis-trans isomerase activity, two-component response regulator activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003723	RNA binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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