Annotation of co-expression genes

PH01000161G1110's details annotation

1.Annotation

ICBR annotation: NB-ARC domain containing protein

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000161
Strand: -

RegionStartEnd
gene837878840485
mRNA837878840485
exon837878838587
exon838674838821
exon838863838965
exon840056840485
CDS838371838587
CDS838674838821
CDS838863838965
CDS840056840106

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.