PH01000165G1190's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G55340 : 2.10E-29
Blast annotation: Protein of unknown function (DUF1639)
2.Location
Scaffold: PH01000165
Strand: -
| Region | Start | End |
| gene | 744099 | 748684 |
| mRNA | 744099 | 748684 |
| exon | 744099 | 744910 |
| exon | 745161 | 745238 |
| exon | 746310 | 746610 |
| exon | 748247 | 748684 |
| CDS | 744863 | 744910 |
| CDS | 745161 | 745238 |
| CDS | 746310 | 746610 |
| CDS | 748247 | 748443 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07797.13 | DUF1639 | 135 | 182 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.