PH01000184G0550's details annotation
1.Annotation
ICBR annotation: CBS domain containing protein, expressed
Blast result AT3G13070 : 2.70E-59
Blast annotation: CBS domain-containing protein / transporter associated domain-containing protein
2.Location
Scaffold: PH01000184
Strand: +
| Region | Start | End |
| gene | 370302 | 372877 |
| mRNA | 370302 | 372877 |
| exon | 370302 | 370624 |
| exon | 371554 | 371637 |
| exon | 371721 | 371745 |
| exon | 371897 | 371994 |
| exon | 372100 | 372193 |
| exon | 372302 | 372384 |
| exon | 372483 | 372581 |
| exon | 372714 | 372877 |
| CDS | 370371 | 370624 |
| CDS | 371554 | 371637 |
| CDS | 371721 | 371745 |
| CDS | 371897 | 371994 |
| CDS | 372100 | 372193 |
| CDS | 372302 | 372384 |
| CDS | 372483 | 372581 |
| CDS | 372714 | 372780 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01595.19 | DUF21 | 112 | 253 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.