Gene details

Annotation of co-expression genes

PH01000195G1320's details annotation

1.Annotation

ICBR annotation: AAA family ATPase, putative, expressed

Blast result AT1G33360 : 2.00E-179
Blast annotation: ATP-dependent Clp protease

2.Location

Scaffold: PH01000195
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000695	STE_STE11 (from iTAK) RLK-Pelle_RLCK-VIIa-1 (from iTAK) SNARE_interactions_in_vesicular_transport
coexpression network	CFinderM001227	RLK-Pelle_RLCK-VIIa-1 (from iTAK) Ubiquitin_mediated_proteolysis Amino_sugar_and_nucleotide_sugar_metabolism Galactose_metabolism galactose metabolic process,
coexpression network	CFinderM001274	mitochondrial ribosome, protein folding, SNARE_interactions_in_vesicular_transport PHD Transcription_Regulator(from iTAK)
coexpression network	CFinderM001788	protein folding, protein catabolic process,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0005524	ATP binding
GO:0006457	protein folding
GO:0017111	nucleoside-triphosphatase activity
GO:0051082	unfolded protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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