PH01000243G1050's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G02050 : 1.20E-31
Blast annotation: NADH-ubiquinone oxidoreductase B18 subunit, putative
2.Location
Scaffold: PH01000243
Strand: +
| Region | Start | End |
| gene | 610615 | 613794 |
| mRNA | 610615 | 613794 |
| exon | 610615 | 613794 |
| CDS | 612591 | 612914 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05676.12 | NDUF_B7 | 15 | 77 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Oxidative phosphorylation | NADH dehydrogenase (ubiquinone) 1 beta subcomplex 7 [EC:1.6.5.3;EC:1.6.99.3] | ko00190 | K03963 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003954 | NADH dehydrogenase activity |
| GO:0005739 | mitochondrion |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.