PH01000271G0830's details annotation
1.Annotation
ICBR annotation: systemin receptor SR160 precursor, putative, expressed
Blast result AT4G39400 : 0.00E+00
Blast annotation: Leucine-rich receptor-like protein kinase family protein
2.Location
Scaffold: PH01000271
Strand: -
| Region | Start | End |
| gene | 577685 | 583015 |
| mRNA | 577685 | 583015 |
| exon | 577685 | 581318 |
| exon | 581386 | 583015 |
| CDS | 578442 | 581318 |
| CDS | 581386 | 581832 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13855.5 | LRR_8 | 187 | 244 |
| PF13855.5 | LRR_8 | 257 | 317 |
| PF13855.5 | LRR_8 | 331 | 391 |
| PF13855.5 | LRR_8 | 429 | 487 |
| PF00560.32 | LRR_1 | 617 | 637 |
| PF00069.24 | Pkinase | 793 | 1064 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Plant hormone signal transduction | protein brassinosteroid insensitive 1 [EC:2.7.10.1;EC:2.7.11.1] | ko04075 | K13415 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.