PH01000287G0330's details annotation
1.Annotation
ICBR annotation: dual specificity protein phosphatase, putative, expressed
Blast result AT3G52180 : 1.80E-30
Blast annotation: dual specificity protein phosphatase (DsPTP1) family protein
2.Location
Scaffold: PH01000287
Strand: +
| Region | Start | End |
| gene | 172729 | 176162 |
| mRNA | 172729 | 176162 |
| exon | 172729 | 173124 |
| exon | 173979 | 174038 |
| exon | 174304 | 174360 |
| exon | 174483 | 174578 |
| exon | 174755 | 174814 |
| exon | 175611 | 176162 |
| CDS | 173050 | 173124 |
| CDS | 173979 | 174038 |
| CDS | 174304 | 174360 |
| CDS | 174483 | 174578 |
| CDS | 174755 | 174814 |
| CDS | 175611 | 175739 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.