PH01000448G0420's details annotation
1.Annotation
ICBR annotation: endonuclease, putative, expressed
Blast result AT1G53250 : 4.50E-34
Blast annotation: -
2.Location
Scaffold: PH01000448
Strand: +
| Region | Start | End |
| gene | 320700 | 324896 |
| mRNA | 320700 | 324896 |
| exon | 320700 | 321743 |
| exon | 322752 | 323194 |
| exon | 323250 | 323323 |
| exon | 323448 | 323485 |
| exon | 323573 | 324029 |
| exon | 324391 | 324896 |
| CDS | 321664 | 321743 |
| CDS | 322752 | 323194 |
| CDS | 323250 | 323323 |
| CDS | 323448 | 323485 |
| CDS | 323573 | 324029 |
| CDS | 324391 | 324597 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.