PH01000462G0070's details annotation
1.Annotation
ICBR annotation: diacylglycerol kinase, putative, expressed
Blast result AT5G23450 : 1.60E-57
Blast annotation: long-chain base (LCB) kinase 1
2.Location
Scaffold: PH01000462
Strand: -
| Region | Start | End |
| gene | 66284 | 70121 |
| mRNA | 66284 | 70121 |
| exon | 66284 | 66846 |
| exon | 67087 | 67544 |
| exon | 67949 | 68017 |
| exon | 68204 | 68303 |
| exon | 68489 | 68635 |
| exon | 69002 | 69039 |
| exon | 69124 | 69217 |
| exon | 69490 | 69646 |
| exon | 69926 | 70121 |
| CDS | 66697 | 66846 |
| CDS | 67087 | 67544 |
| CDS | 67949 | 68017 |
| CDS | 68204 | 68303 |
| CDS | 68489 | 68635 |
| CDS | 69002 | 69039 |
| CDS | 69124 | 69217 |
| CDS | 69490 | 69646 |
| CDS | 69926 | 69963 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00781.23 | DAGK_cat | 38 | 169 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003951 | NAD+ kinase activity |
| GO:0004143 | diacylglycerol kinase activity |
| GO:0007205 | protein kinase C-activating G-protein coupled receptor signaling pathway |
| GO:0008152 | metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.