PH01000500G0160's details annotation
1.Annotation
ICBR annotation: TKL_IRAK_CrRLK1L-1.15 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
Blast result AT1G30570 : 0
Blast annotation: hercules receptor kinase 2
2.Location
Scaffold: PH01000500
Strand: +
| Region | Start | End |
| gene | 107033 | 114307 |
| mRNA | 107033 | 114307 |
| exon | 107033 | 107712 |
| exon | 108316 | 108500 |
| exon | 109874 | 109913 |
| exon | 109966 | 110108 |
| exon | 111320 | 111425 |
| exon | 111615 | 114307 |
| CDS | 107181 | 107712 |
| CDS | 108316 | 108500 |
| CDS | 109874 | 109913 |
| CDS | 109966 | 110108 |
| CDS | 111320 | 111425 |
| CDS | 111615 | 114253 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12819.6 | Malectin_like | 399 | 764 |
| PF07714.16 | Pkinase_Tyr | 888 | 1150 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.