PH01000580G0340's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G13940 : 7.90E-21
Blast annotation: Plant protein of unknown function (DUF863)
2.Location
Scaffold: PH01000580
Strand: -
| Region | Start | End |
| gene | 259231 | 262214 |
| mRNA | 259231 | 262214 |
| exon | 259231 | 260821 |
| exon | 260984 | 261707 |
| exon | 261849 | 262214 |
| CDS | 259431 | 260821 |
| CDS | 260984 | 261707 |
| CDS | 261849 | 262073 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05904.10 | DUF863 | 130 | 348 |
| PF05904.10 | DUF863 | 520 | 769 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.