PH01000585G0420's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G45610 : 1.70E-16
Blast annotation: protein dimerizations
2.Location
Scaffold: PH01000585
Strand: -
| Region | Start | End |
| gene | 243319 | 252893 |
| mRNA | 243319 | 252893 |
| exon | 243319 | 243394 |
| exon | 243440 | 243636 |
| exon | 243933 | 244087 |
| exon | 244334 | 244416 |
| exon | 244949 | 245055 |
| exon | 245173 | 245425 |
| exon | 246164 | 246246 |
| exon | 247027 | 247095 |
| exon | 247464 | 247781 |
| exon | 247867 | 247898 |
| exon | 247995 | 248218 |
| exon | 248417 | 248514 |
| exon | 248780 | 248818 |
| exon | 250424 | 250494 |
| exon | 252121 | 252893 |
| CDS | 243352 | 243394 |
| CDS | 243440 | 243636 |
| CDS | 243933 | 244087 |
| CDS | 244334 | 244416 |
| CDS | 244949 | 245055 |
| CDS | 245173 | 245425 |
| CDS | 246164 | 246246 |
| CDS | 247027 | 247095 |
| CDS | 247464 | 247781 |
| CDS | 247867 | 247898 |
| CDS | 247995 | 248218 |
| CDS | 248417 | 248514 |
| CDS | 248780 | 248818 |
| CDS | 250424 | 250494 |
| CDS | 252121 | 252154 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.