PH01000592G0360's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G32620 : 1.00E-107
Blast annotation: Enhancer of polycomb-like transcription factor protein
2.Location
Scaffold: PH01000592
Strand: -
| Region | Start | End |
| gene | 225275 | 236344 |
| mRNA | 225275 | 236344 |
| exon | 225275 | 226166 |
| exon | 226254 | 226506 |
| exon | 227216 | 228962 |
| exon | 230276 | 230358 |
| exon | 232717 | 233069 |
| exon | 233149 | 236344 |
| CDS | 225610 | 226166 |
| CDS | 226254 | 226506 |
| CDS | 227216 | 228962 |
| CDS | 230276 | 230358 |
| CDS | 232717 | 233069 |
| CDS | 233149 | 234928 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10513.8 | EPL1 | 1179 | 1270 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.