PH01000610G0250's details annotation
1.Annotation
ICBR annotation: secretory carrier-associated membrane protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000610
Strand: +
| Region | Start | End |
| gene | 189222 | 192103 |
| mRNA | 189222 | 192103 |
| exon | 189222 | 189743 |
| exon | 189919 | 190015 |
| exon | 191178 | 191272 |
| exon | 191464 | 192103 |
| CDS | 189566 | 189743 |
| CDS | 189919 | 190015 |
| CDS | 191178 | 191272 |
| CDS | 191464 | 191621 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04144.12 | SCAMP | 66 | 96 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0015031 | protein transport |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.