PH01000625G0660's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G39860 : 1.80E-93
Blast annotation: -
2.Location
Scaffold: PH01000625
Strand: +
| Region | Start | End |
| gene | 414392 | 419082 |
| mRNA | 414392 | 419082 |
| exon | 414392 | 415445 |
| exon | 415567 | 415640 |
| exon | 416513 | 416581 |
| exon | 416758 | 416887 |
| exon | 417242 | 417553 |
| exon | 418466 | 419082 |
| CDS | 415323 | 415445 |
| CDS | 415567 | 415640 |
| CDS | 416513 | 416581 |
| CDS | 416758 | 416887 |
| CDS | 417242 | 417553 |
| CDS | 418466 | 418738 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13266.5 | DUF4057 | 3 | 70 |
| PF13266.5 | DUF4057 | 90 | 324 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.