PH01000644G0480's details annotation
1.Annotation
ICBR annotation: AGAP003371-PA, putative, expressed
Blast result AT3G12150 : 3.00E-134
Blast annotation: -
2.Location
Scaffold: PH01000644
Strand: -
| Region | Start | End |
| gene | 334739 | 336989 |
| mRNA | 334739 | 336989 |
| exon | 334739 | 335015 |
| exon | 335282 | 335595 |
| exon | 335919 | 336115 |
| exon | 336174 | 336258 |
| exon | 336694 | 336989 |
| CDS | 334860 | 335015 |
| CDS | 335282 | 335595 |
| CDS | 335919 | 336115 |
| CDS | 336174 | 336258 |
| CDS | 336694 | 336934 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF09752.8 | DUF2048 | 8 | 329 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.