Annotation of co-expression genes

PH01000679G0340's details annotation

1.Annotation

ICBR annotation: diacylglycerol kinase, putative, expressed

Blast result AT2G20900 : 0.00E+00
Blast annotation: diacylglycerol kinase 5

2.Location

Scaffold: PH01000679
Strand: -

RegionStartEnd
gene214428219895
mRNA214428219895
exon214428215049
exon215123215239
exon215344215431
exon215659215733
exon215955216007
exon216139216221
exon216559216607
exon216757216880
exon217107217192
exon217723217851
exon217942218064
exon218179218401
exon218597219895
CDS214720215049
CDS215123215239
CDS215344215431
CDS215659215733
CDS215955216007
CDS216139216221
CDS216559216607
CDS216757216880
CDS217107217192
CDS217723217851
CDS217942218064
CDS218179218401
CDS218597218610

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF00781.23DAGK_cat50186
PF00609.18DAGK_acc243412

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0003951NAD+ kinase activity
GO:0004143diacylglycerol kinase activity
GO:0007205protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0008152metabolic process

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.