PH01000726G0380's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G25730 : 0.00E+00
Blast annotation: -
2.Location
Scaffold: PH01000726
Strand: -
| Region | Start | End |
| gene | 258868 | 274831 |
| mRNA | 258868 | 274831 |
| exon | 258868 | 260183 |
| exon | 261093 | 261395 |
| exon | 261468 | 261940 |
| exon | 262894 | 263255 |
| exon | 263338 | 263488 |
| exon | 264306 | 264443 |
| exon | 266901 | 266972 |
| exon | 267066 | 267161 |
| exon | 268057 | 268180 |
| exon | 269140 | 269543 |
| exon | 270273 | 270447 |
| exon | 271235 | 271350 |
| exon | 271557 | 271811 |
| exon | 271861 | 272028 |
| exon | 272157 | 272429 |
| exon | 272853 | 272997 |
| exon | 273970 | 274831 |
| CDS | 259940 | 260183 |
| CDS | 261093 | 261395 |
| CDS | 261468 | 261940 |
| CDS | 262894 | 263255 |
| CDS | 263338 | 263488 |
| CDS | 264306 | 264443 |
| CDS | 266901 | 266972 |
| CDS | 267066 | 267161 |
| CDS | 268057 | 268180 |
| CDS | 269140 | 269543 |
| CDS | 270273 | 270447 |
| CDS | 271235 | 271350 |
| CDS | 271557 | 271811 |
| CDS | 271861 | 272028 |
| CDS | 272157 | 272429 |
| CDS | 272853 | 272997 |
| CDS | 273970 | 274682 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.