PH01000786G0680's details annotation
1.Annotation
ICBR annotation: heat shock protein DnaJ, putative, expressed
Blast result AT5G22080 : 1.60E-75
Blast annotation: Chaperone DnaJ-domain superfamily protein
2.Location
Scaffold: PH01000786
Strand: +
| Region | Start | End |
| gene | 509128 | 515671 |
| mRNA | 509128 | 515671 |
| exon | 509128 | 509749 |
| exon | 511074 | 511134 |
| exon | 511546 | 511692 |
| exon | 511924 | 511984 |
| exon | 512538 | 512615 |
| exon | 512755 | 512828 |
| exon | 513577 | 513690 |
| exon | 513769 | 513876 |
| exon | 513930 | 514028 |
| exon | 514639 | 514677 |
| exon | 514746 | 515671 |
| CDS | 509661 | 509749 |
| CDS | 511074 | 511134 |
| CDS | 511546 | 511692 |
| CDS | 511924 | 511984 |
| CDS | 512538 | 512615 |
| CDS | 512755 | 512828 |
| CDS | 513577 | 513690 |
| CDS | 513769 | 513876 |
| CDS | 513930 | 514028 |
| CDS | 514639 | 514677 |
| CDS | 514746 | 514832 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.