PH01000903G0060's details annotation
1.Annotation
ICBR annotation: bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed
Blast result AT4G19710 : 1.30E-43
Blast annotation: aspartate kinase-homoserine dehydrogenase ii
2.Location
Scaffold: PH01000903
Strand: -
| Region | Start | End |
| gene | 37457 | 40719 |
| mRNA | 37457 | 40719 |
| exon | 37457 | 38168 |
| exon | 38992 | 39056 |
| exon | 39473 | 39538 |
| exon | 40512 | 40719 |
| CDS | 37777 | 38168 |
| CDS | 38992 | 39056 |
| CDS | 39473 | 39538 |
| CDS | 40512 | 40588 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00696.27 | AA_kinase | 88 | 159 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004072 | aspartate kinase activity |
| GO:0008652 | cellular amino acid biosynthetic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.