PH01000966G0700's details annotation
1.Annotation
ICBR annotation: peptide-N4-asparagine amidase A, putative, expressed
Blast result AT3G14920 : 1.00E-139
Blast annotation: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
2.Location
Scaffold: PH01000966
Strand: -
| Region | Start | End |
| gene | 458526 | 461567 |
| mRNA | 458526 | 461567 |
| exon | 458526 | 461087 |
| exon | 461237 | 461567 |
| CDS | 459678 | 461087 |
| CDS | 461237 | 461392 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001056 | RLK-Pelle_LRR-III (from iTAK) RLK-Pelle_URK-1 (from iTAK) protein phosphorylation, transferase activity, transferring phosphorus-containing groups, protein kinase activity, ATP binding, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12222.7 | PNGaseA | 51 | 417 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.