PH01001058G0140's details annotation
1.Annotation
ICBR annotation: sulfate transporter, putative, expressed
Blast result AT1G23090 : 1.30E-85
Blast annotation: sulfate transporter 91
2.Location
Scaffold: PH01001058
Strand: +
| Region | Start | End |
| gene | 94557 | 98751 |
| mRNA | 94557 | 98751 |
| exon | 94557 | 95409 |
| exon | 95858 | 96065 |
| exon | 96165 | 96336 |
| exon | 96456 | 96521 |
| exon | 97266 | 98751 |
| CDS | 95103 | 95409 |
| CDS | 95858 | 96065 |
| CDS | 96165 | 96336 |
| CDS | 96456 | 96521 |
| CDS | 97266 | 97304 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00916.19 | Sulfate_transp | 104 | 251 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008272 | sulfate transport |
| GO:0015116 | sulfate transmembrane transporter activity |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.