PH01001062G0350's details annotation
1.Annotation
ICBR annotation: folic acid binding protein, putative, expressed
Blast result AT2G20830 : 2.70E-76
Blast annotation: transferases;folic acid binding
2.Location
Scaffold: PH01001062
Strand: +
| Region | Start | End |
| gene | 282239 | 284904 |
| mRNA | 282239 | 284904 |
| exon | 282239 | 282418 |
| exon | 282692 | 282928 |
| exon | 283712 | 284154 |
| exon | 284232 | 284904 |
| CDS | 282324 | 282418 |
| CDS | 282692 | 282928 |
| CDS | 283712 | 284154 |
| CDS | 284232 | 284743 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000019 | oxidoreductase activity, acting on CH-OH group of donors, metabolic process, folic acid binding, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07837.11 | FTCD_N | 132 | 325 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005542 | folic acid binding |
| GO:0008152 | metabolic process |
| GO:0016740 | transferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.