PH01001115G0590's details annotation
1.Annotation
ICBR annotation: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
Blast result AT1G31420 : 3.20E-39
Blast annotation: Leucine-rich repeat protein kinase family protein
2.Location
Scaffold: PH01001115
Strand: +
| Region | Start | End |
| gene | 337325 | 340053 |
| mRNA | 337325 | 340053 |
| exon | 337325 | 338748 |
| exon | 338839 | 338974 |
| exon | 339165 | 339236 |
| exon | 339355 | 339426 |
| exon | 339828 | 340053 |
| CDS | 338655 | 338748 |
| CDS | 338839 | 338974 |
| CDS | 339165 | 339236 |
| CDS | 339355 | 339426 |
| CDS | 339828 | 339903 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08263.11 | LRRNT_2 | 31 | 68 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.