PH01001158G0590's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G33140 : 1.80E-66
Blast annotation: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
2.Location
Scaffold: PH01001158
Strand: +
| Region | Start | End |
| gene | 351032 | 357734 |
| mRNA | 351032 | 357734 |
| exon | 351032 | 352352 |
| exon | 353199 | 353317 |
| exon | 354327 | 354821 |
| exon | 355148 | 355245 |
| exon | 355356 | 355415 |
| exon | 355523 | 355570 |
| exon | 356257 | 356381 |
| exon | 356611 | 357734 |
| CDS | 352153 | 352352 |
| CDS | 353199 | 353317 |
| CDS | 354327 | 354821 |
| CDS | 355148 | 355245 |
| CDS | 355356 | 355415 |
| CDS | 355523 | 355570 |
| CDS | 356257 | 356381 |
| CDS | 356611 | 356821 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.