PH01001235G0240's details annotation
1.Annotation
ICBR annotation: kinesin motor domain containing protein, putative, expressed
Blast result AT3G45850 : 0.00E+00
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01001235
Strand: +
| Region | Start | End |
| gene | 153274 | 161538 |
| mRNA | 153274 | 161538 |
| exon | 153274 | 153793 |
| exon | 154498 | 154627 |
| exon | 154726 | 154884 |
| exon | 154968 | 155441 |
| exon | 155964 | 156033 |
| exon | 156626 | 156684 |
| exon | 156780 | 156849 |
| exon | 157411 | 157487 |
| exon | 157566 | 157619 |
| exon | 157695 | 157775 |
| exon | 157865 | 157976 |
| exon | 158419 | 158505 |
| exon | 158585 | 158760 |
| exon | 158836 | 158997 |
| exon | 159109 | 159216 |
| exon | 159308 | 159466 |
| exon | 159525 | 159656 |
| exon | 160148 | 160249 |
| exon | 160586 | 160702 |
| exon | 160808 | 161538 |
| CDS | 153579 | 153793 |
| CDS | 154498 | 154627 |
| CDS | 154726 | 154884 |
| CDS | 154968 | 155441 |
| CDS | 155964 | 156033 |
| CDS | 156626 | 156684 |
| CDS | 156780 | 156849 |
| CDS | 157411 | 157487 |
| CDS | 157566 | 157619 |
| CDS | 157695 | 157775 |
| CDS | 157865 | 157976 |
| CDS | 158419 | 158505 |
| CDS | 158585 | 158760 |
| CDS | 158836 | 158997 |
| CDS | 159109 | 159216 |
| CDS | 159308 | 159466 |
| CDS | 159525 | 159656 |
| CDS | 160148 | 160249 |
| CDS | 160586 | 160702 |
| CDS | 160808 | 161011 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00225.22 | Kinesin | 70 | 325 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003777 | microtubule motor activity |
| GO:0005524 | ATP binding |
| GO:0005875 | microtubule associated complex |
| GO:0007018 | microtubule-based movement |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.