PH01001396G0290's details annotation
1.Annotation
ICBR annotation: armadillo/beta-catenin-like repeat family protein, expressed
Blast result AT2G05810 : 6.70E-75
Blast annotation: ARM repeat superfamily protein
2.Location
Scaffold: PH01001396
Strand: +
| Region | Start | End |
| gene | 202884 | 208384 |
| mRNA | 202884 | 208384 |
| exon | 202884 | 204097 |
| exon | 204335 | 204425 |
| exon | 206414 | 208384 |
| CDS | 203892 | 204097 |
| CDS | 204335 | 204425 |
| CDS | 206414 | 207730 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005488 | binding |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.