PH01001399G0160's details annotation
1.Annotation
ICBR annotation: annexin, putative, expressed
Blast result AT1G68090 : 8.30E-42
Blast annotation: annexin 5
2.Location
Scaffold: PH01001399
Strand: +
| Region | Start | End |
| gene | 121742 | 122972 |
| mRNA | 121742 | 122972 |
| exon | 121742 | 122063 |
| exon | 122415 | 122630 |
| exon | 122718 | 122972 |
| CDS | 121851 | 122063 |
| CDS | 122415 | 122630 |
| CDS | 122718 | 122846 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001852 | calcium-dependent phospholipid binding, single-stranded DNA binding, DNA_replication |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00191.19 | Annexin | 11 | 75 |
| PF00191.19 | Annexin | 94 | 160 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005509 | calcium ion binding |
| GO:0005544 | calcium-dependent phospholipid binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.