PH01001405G0550's details annotation
1.Annotation
ICBR annotation: frigida, putative, expressed
Blast result AT4G14900 : 7.00E-108
Blast annotation: FRIGIDA-like protein
2.Location
Scaffold: PH01001405
Strand: +
| Region | Start | End |
| gene | 334471 | 336679 |
| mRNA | 334471 | 336679 |
| exon | 334471 | 335251 |
| exon | 335366 | 335603 |
| exon | 335658 | 336679 |
| CDS | 334727 | 335251 |
| CDS | 335366 | 335603 |
| CDS | 335658 | 335728 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07899.10 | Frigida | 113 | 401 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.