PH01001429G0420's details annotation
1.Annotation
ICBR annotation: transporter family protein, putative, expressed
Blast result AT4G32272 : 6.50E-98
Blast annotation: Nucleotide/sugar transporter family protein
2.Location
Scaffold: PH01001429
Strand: +
| Region | Start | End |
| gene | 344461 | 349706 |
| mRNA | 344461 | 349706 |
| exon | 344461 | 345018 |
| exon | 345770 | 345846 |
| exon | 346407 | 346565 |
| exon | 346680 | 346813 |
| exon | 347208 | 347338 |
| exon | 347423 | 347467 |
| exon | 347549 | 347646 |
| exon | 348730 | 348786 |
| exon | 348870 | 349706 |
| CDS | 344871 | 345018 |
| CDS | 345770 | 345846 |
| CDS | 346407 | 346565 |
| CDS | 346680 | 346813 |
| CDS | 347208 | 347338 |
| CDS | 347423 | 347467 |
| CDS | 347549 | 347646 |
| CDS | 348730 | 348786 |
| CDS | 348870 | 348944 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03151.15 | TPT | 45 | 207 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.