PH01001441G0170's details annotation
1.Annotation
ICBR annotation: cytidylyltransferase domain containing protein, expressed
Blast result AT2G18250 : 3.90E-59
Blast annotation: 4-phosphopantetheine adenylyltransferase
2.Location
Scaffold: PH01001441
Strand: -
| Region | Start | End |
| gene | 130190 | 133787 |
| mRNA | 130190 | 133787 |
| exon | 130190 | 130386 |
| exon | 130738 | 130872 |
| exon | 131014 | 131083 |
| exon | 131230 | 131324 |
| exon | 131982 | 132041 |
| exon | 132914 | 132985 |
| exon | 133302 | 133787 |
| CDS | 130267 | 130386 |
| CDS | 130738 | 130872 |
| CDS | 131014 | 131083 |
| CDS | 131230 | 131324 |
| CDS | 131982 | 132041 |
| CDS | 132914 | 132985 |
| CDS | 133302 | 133463 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01467.25 | CTP_transf_like | 38 | 176 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Pantothenate and CoA biosynthesis | pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] | ko00770 | K02201 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0009058 | biosynthetic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.