PH01001546G0100's details annotation
1.Annotation
ICBR annotation: C-Myc-binding protein, putative, expressed
Blast result AT2G14045 : 2.40E-33
Blast annotation: -
2.Location
Scaffold: PH01001546
Strand: -
| Region | Start | End |
| gene | 85667 | 90719 |
| mRNA | 85667 | 90719 |
| exon | 85667 | 86506 |
| exon | 88928 | 89051 |
| exon | 89490 | 89538 |
| exon | 89623 | 89695 |
| exon | 90096 | 90158 |
| exon | 90295 | 90719 |
| CDS | 86414 | 86506 |
| CDS | 88928 | 89051 |
| CDS | 89490 | 89538 |
| CDS | 89623 | 89695 |
| CDS | 90096 | 90158 |
| CDS | 90295 | 90357 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003713 | transcription coactivator activity |
| GO:0006355 | regulation of transcription, DNA-dependent |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.