PH01001679G0150's details annotation
1.Annotation
ICBR annotation: phosphatidylinositol transfer, putative, expressed
Blast result AT1G55690 : 5.00E-132
Blast annotation: Sec14p-like phosphatidylinositol transfer family protein
2.Location
Scaffold: PH01001679
Strand: -
| Region | Start | End |
| gene | 88819 | 94608 |
| mRNA | 88819 | 94608 |
| exon | 88819 | 89163 |
| exon | 89811 | 90169 |
| exon | 90304 | 90463 |
| exon | 90674 | 90793 |
| exon | 91099 | 91198 |
| exon | 91292 | 91341 |
| exon | 91597 | 91674 |
| exon | 92619 | 92885 |
| exon | 93005 | 93104 |
| exon | 93195 | 94608 |
| CDS | 88978 | 89163 |
| CDS | 89811 | 90169 |
| CDS | 90304 | 90463 |
| CDS | 90674 | 90793 |
| CDS | 91099 | 91198 |
| CDS | 91292 | 91341 |
| CDS | 91597 | 91674 |
| CDS | 92619 | 92885 |
| CDS | 93005 | 93104 |
| CDS | 93195 | 93550 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03765.14 | CRAL_TRIO_N | 110 | 137 |
| PF00650.19 | CRAL_TRIO | 161 | 271 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.