PH01001767G0280's details annotation
1.Annotation
ICBR annotation: BT1 family protein, putative, expressed
Blast result AT2G32040 : 1.20E-76
Blast annotation: Major facilitator superfamily protein
2.Location
Scaffold: PH01001767
Strand: -
| Region | Start | End |
| gene | 199000 | 203834 |
| mRNA | 199000 | 203834 |
| exon | 199000 | 199990 |
| exon | 200995 | 201666 |
| exon | 202133 | 202225 |
| exon | 202313 | 202481 |
| exon | 202906 | 203154 |
| exon | 203250 | 203834 |
| CDS | 199706 | 199990 |
| CDS | 200995 | 201666 |
| CDS | 202133 | 202225 |
| CDS | 202313 | 202481 |
| CDS | 202906 | 203154 |
| CDS | 203250 | 203308 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03092.15 | BT1 | 53 | 192 |
| PF03092.15 | BT1 | 411 | 496 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.