PH01001785G0230's details annotation
1.Annotation
ICBR annotation: DnaK family protein, putative, expressed
Blast result AT1G11660 : 0.00E+00
Blast annotation: heat shock protein 70 (Hsp 70) family protein
2.Location
Scaffold: PH01001785
Strand: -
| Region | Start | End |
| gene | 136741 | 146482 |
| mRNA | 136741 | 146482 |
| exon | 136741 | 137170 |
| exon | 138365 | 138447 |
| exon | 138892 | 139022 |
| exon | 139433 | 139561 |
| exon | 139950 | 140007 |
| exon | 140302 | 140438 |
| exon | 141084 | 141230 |
| exon | 141305 | 141505 |
| exon | 142344 | 142391 |
| exon | 142526 | 142594 |
| exon | 142678 | 142770 |
| exon | 144602 | 144814 |
| exon | 144925 | 146482 |
| CDS | 136833 | 137170 |
| CDS | 138365 | 138447 |
| CDS | 138892 | 139022 |
| CDS | 139433 | 139561 |
| CDS | 139950 | 140007 |
| CDS | 140302 | 140438 |
| CDS | 141084 | 141230 |
| CDS | 141305 | 141505 |
| CDS | 142344 | 142391 |
| CDS | 142526 | 142594 |
| CDS | 142678 | 142770 |
| CDS | 144602 | 144814 |
| CDS | 144925 | 146082 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00012.19 | HSP70 | 3 | 648 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.