PH01001873G0240's details annotation
1.Annotation
ICBR annotation: DUF221 domain containing protein, expressed
Blast result AT1G69450 : 1.20E-26
Blast annotation: Early-responsive to dehydration stress protein (ERD4)
2.Location
Scaffold: PH01001873
Strand: +
| Region | Start | End |
| gene | 112431 | 115729 |
| mRNA | 112431 | 115729 |
| exon | 112431 | 113519 |
| exon | 113731 | 113886 |
| exon | 113933 | 114065 |
| exon | 115191 | 115729 |
| CDS | 113425 | 113519 |
| CDS | 113731 | 113886 |
| CDS | 113933 | 114065 |
| CDS | 115191 | 115421 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13967.5 | RSN1_TM | 33 | 116 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.